rs238541510 SNP Detail

Summary

• ID
  rs238541510
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:136640531 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GATTTTCCAG TCTGTCTGAA
  GTCCCTCACT GTTTATGCAG CAGCTGGTCC AGCAAGGCCC TCCCGCCGGG CCTTTCCATG
  ATGGGGACAG CCACTGGGGA CACGGGGAGA CAGCCACTGC CTCTCTGGGG GGCTGCCAGA
  GGAAGCCATG ATGACATTTC CATCTTCGGG GTCTCCAAGA CCAGGCTTGC TTATTTTGTT
  K
  TTGTTGTTGT TATTGTTGTT GTTTAAAAAG ACAGAAAGGG AGTTTCTGAG AACCCCAGTG
  TGCCAGTTCA CTTCAAAGAA AAAGGAACAA AGAAAGAAAA ACCCGAAACA AGGGGCGAAG
  GTGAAGCTCA GAAATGGTTT TGAATATTTT TTCTATTTAT TTATTTATTT ATTTATTTAT
  TTATTTATTT ATTTATTTAT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321359223	CHEV_4_136469135	CHEVERUD	SCREENING_POP	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs238541510					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:136640531 () rs orientation: forward

Symbol	Name	Function Class
Gm69228	predicted gene, 69228	253 bp upstream
Rr602496	regulatory region 602496	1489 bp distal
Rr602497	regulatory region 602497	1805 bp distal
Rr602498	regulatory region 602498	66 bp distal
Rr602499	regulatory region 602499	937 bp proximal
Rr602500	regulatory region 602500	1523 bp proximal