rs238509555 SNP Detail

Summary

• ID
  rs238509555
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:58489995 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    ACGGATTAA AACAAACTGC TAGTCATTCT
  GCAGATACTA GAAGGGCTGG GGCAGAGCTG GAGAGGCAGA GCCCCACTCG CCGACAGAAA
  CGGGATTCCT TAAGAAGACC GTGCGTTACC GATTTATGTT TCTATATATT TCAAAACAAC
  R
  CTAAAACAAA ATGTTCCTAT AGCTTAACGA GATTTTGGAA TCTCGTGGGT AAAAGGTTCC
  AGAAACATAA AGTAAAACAA AGTTCAGCAA ATGGTTAAGG TGGAGAGAAC AAGTCCGATA
  GAGTTCCTCT GTGCTTCTGC TGTGAGATCC                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321138265	CHEV_4_58502867	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs238509555					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:58489995 () rs orientation: forward

Symbol	Name	Function Class
Lpar1	lysophosphatidic acid receptor 1	Intron
Rr592898	regulatory region 592898	461 bp proximal