rs238404341 SNP Detail

Summary

• ID
  rs238404341
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:95418245 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    GAAGAAATA GAATGAGGTA TGACTGCCAT
  ATGGGTAAGG CACAAGTGAC AGTGAGAAGA ATAGTGGTGT TCCTCAGAAA TTGCAGTATT
  CTAACTTCTA GGTATCATTT GATGCAAAGA ATCAAACTTT GATGTCCTTC TGGCCTCGAG
  Y
  TTTTACTTTC CTCTTCTTAT ACTAGAAGGA CAGGTgagac agggtttttc tatgtagccc
  tggctattct agaactcatt ttgtagacca ggctggcttt gatcttcata atttgcctgc
  ttACTTCTGT ATATCATACA CTATTTCAGG                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320401593	CHEV_2_95428057	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs238404341					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:95418245 () rs orientation: forward

Symbol	Name	Function Class
Rr561415	regulatory region 561415	443 bp distal