rs238336124 SNP Detail

Summary

• ID
  rs238336124
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:16365705 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTCTTTTATC CTGTTAGGAG
  ACAGGTGAAC CCCAAGCTGA CTGCAATGCA CTCACAGTAC TAATATTATA CTAGACTCTC
  ATCCTGGGAG TTGAGACTCC TTTGGGGTCA CATAATAGTA GCAAAATTGC AGTTATGAAG
  TAACACTTAA ATAATTTTTG GTTGGGGTCA CCACAACATT AGGAACTCTA TTAAAGCAAC
  M
  CAGAATTAGA AAGTTTGAAT ACCAGTGTAC TAGACTATGA ACTTATATTC CGAGCCACAC
  ACTTAAAAAA TTTTAATTTT GATGTTTTAG ATATGTGTAT TTGTGTTTGA ATGGAGGATT
  GTACACTTGA GTAGAGTTCC CAGGGAGGCC AGAAAGGTAT CTCAGATTCT GGAGTCATAG
  TGAGTTATGT ACTATGTGAT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320671144	CHEV_3_16211541	CHEVERUD	SCREENING_POP	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs238336124					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:16365705 () rs orientation: forward

Symbol	Name	Function Class
Rr573795	regulatory region 573795	411 bp distal
Rr573796	regulatory region 573796	487 bp distal