rs238295789 SNP Detail

Summary

• ID
  rs238295789
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:121570619 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TTTTAAACTC ATTTTTAGTT TAAAACACAG TATAAAGATT
  TGCTATTTAA AATATATCTT TAGCATTATT CATCCACATG TAAAGGCAGA GAAACCCGCG
  Y
  GGCCGCCCGT CCAGTGTTTA TCTTACCAGT TTTCGGAAGA CTGAGTGGAT TGTCTGCTTC
  TCCCGTTTAT TCCCATTGTA AAAGGCAATT TCTTCACTA                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320905782	CHEV_3_121479888	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs238295789					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:121570619 () rs orientation: forward

Symbol	Name	Function Class
Abcd3	ATP-binding cassette, sub-family D member 3	Intron
Rr584166	regulatory region 584166	938 bp proximal
Rr584167	regulatory region 584167	1236 bp proximal
Rr584168	regulatory region 584168	1582 bp proximal