rs238236288 SNP Detail

Summary

• ID
  rs238236288
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:150206150 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GCACC TGTGATTGGT TCCAGCTCAT
  Y
  GCCCGTTTAG CTGCAGCTAA AACCT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321428294	CHEV_4_149495802	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs238236288					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:150206150 () rs orientation: forward

Symbol	Name	Function Class
Rr605189	regulatory region 605189	720 bp distal
Rr605190	regulatory region 605190	400 bp proximal
Slc2a5	solute carrier family 2 (facilitated glucose transporter), member 5	Intron
Tssr40374	transcription start site region 40374	988 bp downstream