rs238219126 SNP Detail

Summary

• ID
  rs238219126
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:141457294 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACTGAACACT CTGGAAAATC
  CTATGAGGTA TTCGTTACCT TCATTTTACA GATGAAGAGG AGGTGGGAGA GAGAGGGGTC
  AGTCTTTCAG CTAAAGATAC AAAAGCCTTG ACAGGCAGCC CCAGGAGGCA AAACAGGCAG
  TCTGACTCCA GCCTATAGTC TTGTATATTT TTTGAGACAA GACCTATGTA GTCAGGCTCA
  T
  CTGGAACACT CCATCCTCCT GCCTCAGCCT CCAGAGTGCT AGTATTAGAG GCATGAGCTC
  AATGTCTGTC TGAGCTGTTT GAGCTTTTGA GTCTGTTTCA GGAGTTTTTG TGCCTCCAGT
  CCCAGCAAGC CTATAATCTT AGCTACTATG TTAAGATGTC TCATATAGAT CTTTATTCTT
  CAAAATGTTT CCAGAAAGTC                                            
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321389328	CHEV_4_141285898	CHEVERUD	SCREENING_POP	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs238219126					SNP	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:141457294 () rs orientation: forward

Symbol	Name	Function Class
Gm34863	predicted gene, 34863	within coordinates
Rr603867	regulatory region 603867	432 bp distal
Rr603868	regulatory region 603868	166 bp distal
Rr603869	regulatory region 603869	1769 bp proximal