rs237942786 SNP Detail

Summary

• ID
  rs237942786
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:107589417 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACTGAGTGTT CCAGGAATGA
  CAATCAGACC TTTGTTTAAA AAGCTGTTTA TAGTCATCTT GTAACCCTAC CTTTGTTTCA
  AAATGTTATA AGACCACCTG TGACTATCTT ATAATGACTA CCTGTTATTA CGACTACCTT
  GTTAAGCCAC CTTGCAGTGT GACTTTGTTT CAGGAGTCTG TGTAGGACTA ATTTGTTATG
  Y
  ACGTGTTCTG CTCCTATAAA TCCACCTAAT TTGTCCACCA CATCTCCTAC TTGGGAACCC
  CCCACCTCTG AGCTATAAAA GCCCCATCTT CCTCACGCCC AAGGCTGACC TTTTGAACCC
  AGCCTTAGGG GAGGCAGTCA TGTAGTTAAG TCAGAAAGCT GGCTTTAATT AATTTGGCCA
  TGATGGTTTG GGTCTGTGGT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321250550	CHEV_4_107404825	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs237942786					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:107589417 () rs orientation: forward

Symbol	Name	Function Class
1700047F07Rik	RIKEN cDNA 1700047F07 gene	within coordinates
D4Mit43	DNA segment, Chr 4, Massachusetts Institute of Technology 43	1251 bp proximal
Gm70287	predicted gene, 70287	within coordinates
Rr747	regulatory region 747	1106 bp proximal
Rr597051	regulatory region 597051	414 bp distal
Rr597052	regulatory region 597052	within coordinates
Rr597053	regulatory region 597053	1541 bp proximal