rs237917620 SNP Detail

Summary

• ID
  rs237917620
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:129187866 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAGAAGCTGT TCAAGGTGAC
  CAAGGAATGC GTGGCTTACC AATACCAGCT GGAGTGCCGT CAGCAGGATG TGGCTCAGTT
  TGCCGACTGC AGGGAAGCGC TGACCACTCG GGCAGCCCAG CTCTCGGAAG AACTGACCCA
  GCTCCGAGAT GCCTGTCAGA AGCAGAAGGA GCAGTTACAG CAACAACTAG AAGCACCCCC
  K
  ACCCAGAGCG ATGGGCACTT TCTCCAGGAG AGCCGACGGC TGTCGACACA GTTTGAAAAT
  CTCATGGCCG AGAGCCGCCA GGGCCTGGAG GAGGAGTATG AGCCTCAGCT GCTCCGGCTC
  CTGGAAAGGA AAGAGGCCGG GACCAAAGCT CTACAGGACA CCCAGGCGGA GATCCAGGAG
  ATGAGGGAGG CTCTGCGACC                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321311698	CHEV_4_128971317	CHEVERUD	SCREENING_POP	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs237917620					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:129187866 () rs orientation: forward

Symbol	Name	Function Class
Rr600195	regulatory region 600195	1151 bp proximal
Rr600196	regulatory region 600196	1832 bp proximal
Sync	syncoilin	Coding-Synonymous