rs237901769 SNP Detail

Summary

• ID
  rs237901769
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:150171022 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCGAA TCCAGCCCCC ACATGGTGCA
  R
  GGGGTGGGGA GTCTGACGCA CTTTT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321428022	CHEV_4_149460674	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs237901769					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:150171022 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15345	CpG island 15345	528 bp proximal
Gpr157	G protein-coupled receptor 157	938 bp upstream
Rr398878	regulatory region 398878	566 bp upstream
Rr605170	regulatory region 605170	896 bp distal
Rr605171	regulatory region 605171	978 bp distal
Rr605172	regulatory region 605172	310 bp proximal
Rr605173	regulatory region 605173	1148 bp proximal
Rr605174	regulatory region 605174	1460 bp proximal
Tssr40369	transcription start site region 40369	948 bp upstream
Tssr40370	transcription start site region 40370	1081 bp upstream