rs237807483 SNP Detail

Summary

• ID
  rs237807483
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:114328920 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    AATTGCACA TTGCTGCTGA AACTGCCTCC
  AAGCAAAGGA GCTTGCCTGG CTCTGCCTTC ATTATTTCCC ACATCCCTTC ACCTTGCACT
  CAGCTCTTGG CTACCCTAAA ACACccctgc tctcctcccc tcctctccta gctcagccaa
  R
  tcatgagcac tctggactct cccagatgcc tttgcctcta actccaccct ctcacatatc
  tacaataaac ctgcccagcc accattagtt aggaccagtc attttttcct ctccttttta
  tttctattTT TTTCCCCATC CAGTGAGCAC                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321274177	CHEV_4_114144328	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs237807483					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:114328920 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Rr597579	regulatory region 597579			330 bp proximal
Rr597580	regulatory region 597580			618 bp proximal
Trabd2b	TraB domain containing 2B			Intron
				Noncoding-Transcript-Variant
Tssr42814	transcription start site region 42814			818 bp upstream