rs237798210 SNP Detail

Summary

• ID
  rs237798210
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:107423574 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGAAACTTGG CTCCTGGTCC
  AGGTCTGATG CTGACTTGCT ACTGCATGAT GGCCTGGTGG TCCTCAAGCC TCAGGCTGAC
  TCCCTCCTCT GACTCTGCAG GGATACAGGG TCAGAGGCAA AGCTCTGAGT GCCTTTGGGT
  GCCGGCTCTC CTTCCTGCCC CTTTCCTCAC TTCCATTCTC TTCACCTGTC GTCTGGCACC
  R
  AGGGGGCAGG GGCTAGCTCT CCAGGCCACC TTACAGAGCT CAGTTCTGGC TACAAGAGCC
  ATGGGACAGT GGTCCTGAAG AGCAGGAGTA ATGGCACCGT GCCTAGCCCT CTCCTTCCCA
  GGGAGCTGAC CCTTGACCCC AGCCGTTACC CTCATCTACA TTTAGAGGTG TGGCCTCTTG
  TCTCACAGAT AAGGAAGCAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321249096	CHEV_4_107238982	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs237798210					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:107423574 () rs orientation: forward

Symbol	Name	Function Class
Glis1	GLIS family zinc finger 1	Intron
Rr597017	regulatory region 597017	1946 bp proximal