rs237775789 SNP Detail

Summary

• ID
  rs237775789
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:21950527 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    ATTACATTC CGAATTTCTC CAGAGCAAAG
  ACATAGAAGG GCAGGCTAGG GACCCTAGTG AACTCGGAAG GCCGAACTTT GACAAGTTGC
  ATATTAATGG AAGACACTTA GAGCTGTGAA CAGCGTGGAC ACTTTCTCAG CCAGAAATGA
  S
  TGAGAGAGAT CAGATTTTAA GGAAATCACC CGCTTGCTCT TTAGAAAACT GTAGACGTTT
  GATAGGCTTC CCTACTGGtt tcttgttttg taaacacaac cacgtcattc aggctggtct
  cacactcaat atgtataata atcctaggct                                 
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321763865	CHEV_6_21900528	CHEVERUD	SCREENING_POP	f	SNP	G	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs237775789					SNP	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:21950527 () rs orientation: forward

Symbol	Name	Function Class
Gm68432	predicted gene, 68432	1010 bp upstream
Ing3	inhibitor of growth family, member 3	Intron
Rr399583	regulatory region 399583	1028 bp downstream
Rr399584	regulatory region 399584	353 bp downstream
Rr627030	regulatory region 627030	1170 bp distal
Rr627031	regulatory region 627031	861 bp distal
Rr627032	regulatory region 627032	within coordinates
Rr627033	regulatory region 627033	502 bp distal
Tssr55136	transcription start site region 55136	845 bp downstream
Tssr55137	transcription start site region 55137	466 bp downstream
Tssr55138	transcription start site region 55138	127 bp downstream