rs237689577 SNP Detail

Summary

• ID
  rs237689577
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:107113334 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGGCAGGATT CCCTGCTGAC
  CTGGAAGACC AGTGCTGCCC TGAATCCCTT AAGACACACA CAGTAGACAC ATTCTCCCCG
  GACAGCTCAG CTCAGCACAC AAACCCAGTA TCACAACATT CCAGAAAGAT TGGAGAGACA
  GGACTCTGGA GACCAAAAAC AGAAAGAAAA GCTAATCAGA GATATCTGGA GTTATGGGGT
  S
  GAAGACTGGG ACTCCTTTTT TATCTGTGTC CTGAAGAAGC TGCCACTATG CTTTGCATGA
  GGGAGACAGT CAACTCTATT GTCTACTTGA CCACTGCCCC CAAAGTCACC TGAAGTGGCC
  AAGAATGTCC CAAGGTATAA ACAAGATGCT CTAAGTTGGT CTGGTCACTA GAGGGCGCTC
  CAGGACTAGA GCTGCCTCCT                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320864606	CHEV_3_107008936	CHEVERUD	SCREENING_POP	f	SNP	C	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs237689577					SNP	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:107113334 () rs orientation: forward

Symbol	Name	Function Class
Rr582930	regulatory region 582930	within coordinates
Rr582931	regulatory region 582931	161 bp proximal
Rr582932	regulatory region 582932	474 bp proximal
Rr582933	regulatory region 582933	1706 bp proximal