rs237645176 SNP Detail

Summary

• ID
  rs237645176
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:129186771 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGAGGCAGAC TGGGGAGGGG
  AGTAGTGCCT TAGGGTTTCA TTGCTGTGAA CCATGGCAAC TCTCATAAAG GAATACGTTT
  AACCAGGGCT GGCTTACAGT TTCAGAGGTT CAGTCCATTT ATCATCATGG CGGGAAGCAC
  GGCAGCATCC AGGCAGGCAG GGTGCTGGAA GAGCTGAGAG TTCTCCTTTT TGATTCGAGG
  K
  GGGGCAGATG GCGGGTCTCT TCCTCTTCTA CATAGCTCAA AACCCACCCC TACACACACT
  TCCTTTAACA TGGCCACACC TCCTCCAATA AGGCCACACC CTCTAATTAA TAATGCCCCA
  AGGGCCAAGC ATATTCAATT CCCCATAAGT AGCTAAGAGA ACCTGCTGCA GCTAACCGTG
  AGACAGAGGC CCTGTTGACA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321311681	CHEV_4_128970222	CHEVERUD	SCREENING_POP	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs237645176					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:129186771 () rs orientation: forward

Symbol	Name	Function Class
Cpgi14888	CpG island 14888	425 bp proximal
Sync	syncoilin	Intron