rs237623540 SNP Detail

Summary

• ID
  rs237623540
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:73071961 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGCAG GTACATTCTG AGTGGCCGCC
  Y
  AAGGAAGGAA GAAAAGGGAT GCTCC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322260063	CHEV_7_80567099	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs237623540					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:73071961 () rs orientation: forward

Symbol	Name	Function Class
Gm44645	predicted gene 44645	37 bp upstream
Rr380947	regulatory region 380947	1112 bp upstream
Rr648940	regulatory region 648940	410 bp distal
Rr648941	regulatory region 648941	within coordinates
Rr648942	regulatory region 648942	85 bp proximal
Rr648943	regulatory region 648943	438 bp proximal
Rr648944	regulatory region 648944	1795 bp proximal
Tssr72937	transcription start site region 72937	326 bp downstream