rs237581175 SNP Detail

Summary

• ID
  rs237581175
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:112384700 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTTTTAAAT GTTAAGCCTC
  TTCTGGACAG TGTTTCAAAT AATGAGTCTT TCCAGGTTCA ACTGAAAGAT GCCCTGAGAT
  GGATTTCAGA TGAAATAGCC TTTCGCTAAT GGCACCGGGG AAAGCTGGAA TAGATCCACA
  GCAGAGTAAT AAACAAGTTC CTTATCTTTA TATTTAAAGA GGAGGGGTCC TCAGAATTTA
  K
  ATGAGGGCCC ATCTTTGAGC TAAGAGATAA AGGGAGTGTC TCGGAATTTA GCAGGCAGGA
  AGCCCTAATT TAGGAAGCTA ATCTTGTTTA AGGGCACTGA CTGCTCTTCC AAAGGTCCTG
  AGCTCAATTC CCAGCATCCA CATGGTGGCT CACAACCATC TATAATGCGA TTTGGCGTCT
  TCTTCTGGTG TGTTTGAAGA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320459572	CHEV_2_112394512	CHEVERUD	SCREENING_POP	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs237581175					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:112384700 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Aven	apoptosis, caspase activation inhibitor			Intron
				Noncoding-Transcript-Variant
Rr562687	regulatory region 562687			310 bp proximal