rs237448494 SNP Detail

Summary

• ID
  rs237448494
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:114816593 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCACTCCATT CAGCATGCAA
  CTCTGCAAGG GTCCCACAGG TGCCCCCCTC ACTGGCCTCT ATAGCCTGTG GTAGTCAAGC
  AGCAGGGTAT GGAAGTGCCC CCTCTTCCTG TGTTTACCCA TCCGGTAAAC AGTGTCGAGA
  ACCCAGCCAT ACAGAGCCTT TGAGTTAGAG CATGGCAGAG TGGCTTTGCT GTTCAGAAAG
  S
  CAAGGTGGTG CCAGAGGGGG AGGAAGACTC GTTCTGGCCA CCACACTGCA CTGAGCCTCC
  CTCCCCCTCT CTCAGCCATT TCCTGGAAAA CCTACCTAGG GAAGTCATTG CAGACCTGGG
  CTTGGCTTGT CAAGGACCCA CCATGCATTC AGGAAGTGAT TTTTTTCCTC TATTGAAAAC
  ACCAGCATTT AGTATTAACT                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321914857	CHEV_6_114789650	CHEVERUD	SCREENING_POP	f	SNP	G	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs237448494					SNP	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:114816593 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Atg7	autophagy related 7			Intron
				Noncoding-Transcript-Variant
Gm67840	predicted gene, 67840			within coordinates
Rr636840	regulatory region 636840			371 bp distal
Rr636841	regulatory region 636841			647 bp proximal