rs237448347 SNP Detail

Summary

• ID
  rs237448347
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:151866413 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCCTTTATGT CCAAAGACTC
  TAAAGGAGAA CCTCACCAGC TTTGGGCGGC TCTTGGCATG CCCTGGCTTG AAACCACATC
  TCCACTTCTT GCATCATCTG CCTTTGTGGT AACACTGCCC CCTCTTGGTG TTTGCCTCTC
  TTTTACCTGG GCACTTGTGA TGGTAATAAA GGCCCCCTTA GACAGTCCTT ATGTTCTGAT
  Y
  CCTAATTTAA TTACATCTGC AAAGATCCAT TTCCCAAATA GGGTCATACT AACAGAACAC
  AGGGATGAGA GCTTTGGACT TGTCTGGATG GCCATTATTC AGCCTCCTGC AGTGGCCACG
  GGGCACTTTT CTGATTGATG GGCATGCTCT ATGTAGAGAC TGTGGCTAGT CTGCACCATT
  GTCATGTTGT GGCCCTGTAC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320561850	CHEV_2_151850229	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs237448347					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:151866413 () rs orientation: forward

Symbol	Name	Function Class
Gm75398	predicted gene, 75398	185 bp upstream
Gm75402	predicted gene, 75402	within coordinates
Rr374074	regulatory region 374074	within coordinates
Rr567263	regulatory region 567263	68 bp distal
Rr567264	regulatory region 567264	108 bp proximal