rs237091007 SNP Detail

Summary

• ID
  rs237091007
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:125642043 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTGGGGTATC ATTCTTCACA
  AACCATGGAT CCTTACAAAA CTATGATTGC TGCAGTGGAG TTTATCCAGT ACAAAGAAAA
  TATTTTTATC TCAAGAGGGT ACAGCATTTA GATCATCACA TACCCTTGGT TGCCTGTCGG
  TGTGCAGGAA AAACTCAACA AAGCAAAGTG GAAATTAAAC ATTGAATTTA ATCAACACAG
  Y
  CACATGCATG TAGACAAATG ACACTATGAA ATATTGTGTT TGTACTTAAA CACCTAAAGT
  GATTAAATTA ACTGGATAAT TATTAAAAAC CCAGCTCAAC TTGTAATGTC CACATAACTT
  TTACACCCAG CTGTCACCTC CCTCAACCCC TGCCAGCTTC TTGATAGATT TTTATTCCAA
  AGAGTAAATA GGAGAGTCAT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320940415	CHEV_3_125551312	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs237091007					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:125642043 () rs orientation: forward

Symbol	Name	Function Class
Rr584614	regulatory region 584614	846 bp proximal
Rr584615	regulatory region 584615	946 bp proximal