rs237059993 SNP Detail

Summary

• ID
  rs237059993
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:10346572 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTTTTTGTTT TAATGGATAA
  CCTATCACCA CCCATTTGTG CTGCCCATAT ACTCTGGGTG CAGGGCCATC TACCTGAGCA
  TGGTCAACTG AGTAGGAGCC ACATTCTCAA AGAAAACAGA CTCCCTGTCT CTCAGAAACC
  ACAAAGTGTT CATAGCTCTT CACTTTGGCA TGAGGGCTCT TGAATTCCTT CCTACTCCAT
  K
  CTAGAATGTT GACTGGGTTG ATCTCGTGCA GGTCTTATGC AAGAGCACCA GCTGCTATGG
  GTTTATGAAT AGAGTGGTCT TGCCATGTCT AGAAGACCAG TCCAGCCCTC CTTCAACTCT
  GGCTTCTACA ATCTTTCCAC CCCTTCTTCT GAGATGGTCT CCTCAGCACT GGAGAGACAG
  GATGATATAG ATATACCATT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320653248	CHEV_3_10281512	CHEVERUD	SCREENING_POP	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs237059993					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:10346572 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Fabp12	fatty acid binding protein 12			Intron
				Noncoding-Transcript-Variant
Rr573601	regulatory region 573601			within coordinates
Rr573602	regulatory region 573602			1481 bp proximal