rs236927411 SNP Detail

Summary

• ID
  rs236927411
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:135667847 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    cctggagat agagctcact tggtaccatg
  cttgcttgga tacacagagc ccttggttca gttcctggca ctgcataaac caagtgtggt
  atgcatgcct gtgatccaac aggatccgaa gctagtccgg cctgtctata tagtgagctc
  M
  aggctgccct aagctgtata gactgtcCAG AGGAAGGGAA GGAGGAGAGA GCTAGCTTGT
  TTGGTCTCTT TAATGCAGAA CACTGTGTGT GGTCCCTGGG GCTTCTCTCT CATTCTGGTG
  TCTGTCTTTG ACAACTACCA GCTCAACCTG                                 
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321353541	CHEV_4_135496451	CHEVERUD	SCREENING_POP	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs236927411					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:135667847 () rs orientation: forward

Symbol	Name	Function Class
Fuca1	fucosidase, alpha-L- 1, tissue	236 bp downstream
Rr602205	regulatory region 602205	1400 bp distal
Rr602206	regulatory region 602206	1366 bp distal
Rr602207	regulatory region 602207	687 bp proximal
Rr602208	regulatory region 602208	1436 bp proximal