rs236817199 SNP Detail

Summary

• ID
  rs236817199
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:106797360 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAGATAGACA CCTCTGTTCT
  CCTAGAAGAA CAGTTTAGTA TGAGAACAGA AATTTGTTAG AGGTTTGAAG ATGAAACATC
  AAGATGGTTT GCCATTTTAC AAAAGAACCA TTTTTAATCC CAAGTGACAA AATTACTCAG
  TTGCCAAAGG GACATGGTAT TTAAAAGAAA AAACAAAAAT GGTCACACAA AATTGAGGGG
  Y
  TCAAAATATT ATTTATAAGA AACTTATGAG GTCCCAAGGA TCTTTGGACC TTGGAACATT
  CAAGGTTCTG CCTTCTGCCC TTGTCTTTCT TCAAGTGTGT GAATATGTAA TCTTTCATCC
  ATCATCCACA CCTACAAGTG AGTCACCCAC ACAGACTGTG CGTCAGGAAG ACCTGTGATA
  TATGGATGGA CAAAAGACAG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321886888	CHEV_6_106770393	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs236817199					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:106797360 () rs orientation: forward

Symbol	Name	Function Class
Rr635975	regulatory region 635975	350 bp proximal