rs236618812 SNP Detail

Summary

• ID
  rs236618812
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:32457867 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TTTTCTGTT CTCTTAATTA AGCATAAACT
  TATAAATCTA GGGCCTTGTT TCCGGGCTAT GGGAAGTGGA GGAGGGAGTC CAGAGTCTCA
  GCTTCCTGAG CTCTGCCTGT CTCCTTCTCC CAGGTCATTG GTTCCAGGAA CAATGCCTCC
  Y
  TGCCACAGGG ACCCAGAGGG CTGCTCAGCT GAGTCACATG GCCTCTTCTT CCCTAGGATa
  cacacacaca cacacacaca cCACTCCCAC TCCCACCCAG CCCCATAAGG GCTGGCTAAG
  GCATCTATTT GGAGCTTCTG ATTGTCCCCT                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321778275	CHEV_6_32430932	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs236618812					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:32457867 () rs orientation: forward

Symbol	Name	Function Class
Plxna4	plexin A4	Intron
Rr628114	regulatory region 628114	882 bp distal
Rr628115	regulatory region 628115	1415 bp distal
Rr628116	regulatory region 628116	within coordinates