rs236610820 SNP Detail

Summary

• ID
  rs236610820
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:150131653 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAGAC AGGTGGATTT CTGAGTTCAA
  R
  GCCAGCCTGG TCTACAGCAT GAGTT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321427736	CHEV_4_149421305	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs236610820					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:150131653 () rs orientation: forward

Symbol	Name	Function Class
Gm13067	predicted gene 13067	999 bp upstream
Gm69230	predicted gene, 69230	within coordinates
Rr377414	regulatory region 377414	1133 bp upstream
Rr605155	regulatory region 605155	509 bp proximal
Rr605156	regulatory region 605156	1318 bp proximal
Rr605157	regulatory region 605157	1907 bp proximal
Tssr40363	transcription start site region 40363	995 bp upstream
Tssr40364	transcription start site region 40364	1082 bp upstream
Tssr40365	transcription start site region 40365	1977 bp upstream