TGCTGTGGG AAGAGTGGCC AGAGGACACA ATCACAGGGA AGCCCATGGC TGAGGGGAGA GTGAGGATGA CTGGGCAGGG TGGGGGGCAT TAGCAGAGTC ACAGAGAACA GTGGGTGTCC CTCAAGGGCT GGAGAGGGAG CAAAGCTtct R tctgtctatc tgtctgtctg tctgtctgtc tttctctctg tATACACACA CACCACAATG CCCTTTGCCA TTTTTAAAAA TATGTTCACT GTTTCTGTTT CACAGCCAGA ACTGGAGTGA TGTCAGTTTG CTTCTCCAGA GATGGCAGAA R = A/G Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | LG/J |
SM/J |
---|---|---|---|---|---|---|---|
ss320849655 | CHEV_3_100627405 | CHEVERUD | SCREENING_POP | f | SNP | G | A |
SNP Consensus Information | |||||||
SNP | Consensus Type | LG/J |
SM/J |
||||
rs236445529 | SNP | G | A |
Location: Chr3:100730798 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Gm32720 | predicted gene, 32720 | within coordinates | ||||||
Rr581912 | regulatory region 581912 | 1816 bp distal | ||||||
Rr581913 | regulatory region 581913 | 1941 bp distal | ||||||
Rr581914 | regulatory region 581914 | 1805 bp distal | ||||||
Rr581915 | regulatory region 581915 | 1890 bp proximal | ||||||
Tssr30883 | transcription start site region 30883 | 1970 bp upstream | ||||||
Vtcn1 | V-set domain containing T cell activation inhibitor 1 | 1977 bp upstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 03/18/2025 MGI 6.24 |
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