rs236432959 SNP Detail

Summary

• ID
  rs236432959
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:101140105 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TGTCAATAT CCTTTGAACT ATCATTTGGG
  AAGAGATTAG GGCGGGGAAA GTCCTCTCTT CCAAGTCCCT CAACTGCTGC CTTGTCCATC
  TGtccttcct tcctcccttc tctccctccc tccctccctc cctccctccc tccctccctc
  Y
  tttcctcctt tccttcctAC TTTTGGtcct ttcctccttt ccttcctact tttggtcctt
  tcctcctttc cttcctactt ttggtccttt cctcctttcc ttcctacttt TGGTCCTGCT
  TCTATATCTT GAGTGCCAGG ATTATAGATG                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321229188	CHEV_4_100955513	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs236432959					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:101140105 () rs orientation: forward

Symbol	Name	Function Class
Gm12801	predicted gene 12801	1300 bp upstream
Gm69021	predicted gene, 69021	within coordinates
Rr376921	regulatory region 376921	117 bp upstream
Rr596107	regulatory region 596107	1040 bp proximal
Rr596108	regulatory region 596108	1211 bp proximal