rs236357624 SNP Detail

Summary

• ID
  rs236357624
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:141167140 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAGTATCCAC ATAGCAATCA
  GTTCATAAAT GTTAGCTATT AGCAACACAG CGTTTATCTC CGCCCAGGAC TATTCTGTTA
  GGTAGAGTGA TGAATTATCA CTTCTTATTA AAGGTTGTTT AAGTCAGGTT GTTTTCCTTT
  GCTAATAGTC TTTTTTTTTT AATATAGGTA ACAGGAAGTG CAAAGTTTCA GAGAGTGCAT
  R
  TTTATGAGAG ACTAAGTCTC TTTCTCTGGG ATGAGGGAGA GAACTGTGAT TGAACCAGCT
  GATTCTGGAC CATCTGGCCT CCCTTGCGTG AGTTCTACCA GTCATGTTAT AGCCGAGGTC
  TCCACACCCA TCCCCCATCC TACTCAGAGT TTTCCTGTCA TCCTACACAT TTGGTAAAAT
  CCTGCTTCTA TGCAGCTAGT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320992351	CHEV_3_141124343	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs236357624					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:141167140 () rs orientation: forward

Symbol	Name	Function Class
Gm15688	predicted gene 15688	within coordinates
Gm66152	predicted gene, 66152	within coordinates
Rr586318	regulatory region 586318	1046 bp proximal