rs236324709 SNP Detail

Summary

• ID
  rs236324709
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:72283821 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACCCC AAAGCCATCT GCAATCATGT
  A
  GGCCTGTGCC CACGTGGGCA GGCTA                                      
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321821412	CHEV_6_72256831	CHEVERUD	SCREENING_POP	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs236324709					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:72283821 () rs orientation: forward

Symbol	Name	Function Class
Rr632127	regulatory region 632127	1631 bp proximal
Sftpb	surfactant associated protein B	Coding-Synonymous
Tssr57082	transcription start site region 57082	1790 bp downstream
Tssr57083	transcription start site region 57083	1749 bp downstream
Tssr57084	transcription start site region 57084	1177 bp downstream
Tssr57085	transcription start site region 57085	940 bp downstream
Tssr57086	transcription start site region 57086	895 bp downstream
Tssr57087	transcription start site region 57087	860 bp downstream
Tssr57088	transcription start site region 57088	808 bp downstream
Tssr57089	transcription start site region 57089	47 bp downstream
Tssr57090	transcription start site region 57090	within coordinates
Tssr57091	transcription start site region 57091	71 bp upstream
Tssr57092	transcription start site region 57092	301 bp upstream