rs236267501 SNP Detail

Summary

• ID
  rs236267501
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:116017249 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTTTTTATAA ACCTGAGAAT
  CTGTTAACAA TTTTTTCCAG CCTACAAACT GTCCATTCTC CTGAAAAATA AATAAATACA
  TACATACATA CATACATACA TACATACATA CATACATACA TACATACCCA AAATACAAAT
  TGAAAAGGCA GCAGCCCGGA ACTCTCAAAT GCCTGTCTAC TTGCTAAAAT CCCAAACCCT
  R
  CAGTTACCTT TTGTCCCATT CCAACATGCA AGAAAGACAT TTGTCCAGGA AGATGTTGTT
  CTAACGGCTG AATTCTGCCC TCTCAGCAGT CCAGGATTGA GAACAATCTG TTTGTCAAAA
  GTCCCTGGAG TTGCATTATC CAAATAAACA CAGAGCTCAG GGTCTTCTTC TCCTCAGAGG
  AGGGGATCAG AGAGCCACAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320894710	CHEV_3_115926518	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs236267501					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:116017249 () rs orientation: forward

Symbol	Name	Function Class
Rr583673	regulatory region 583673	1413 bp distal
Rr583674	regulatory region 583674	360 bp distal