rs236244495 SNP Detail

Summary

• ID
  rs236244495
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:133591405 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAGTAAAGAC ACAGAAGTGC
  AAGCAGGGAG AACATTCAAA TAGCTGGTTT GGGTTTCACT GTATAGGGCA ACTTTTAGAC
  ATCTCAAATG CAATAGCATG TTGCAAAGCA GAAGACATGT AACCATCTGA CTACTGTTTA
  AAGTCACTCA AGCTACCTAA TGAAGAAAAG TATTCAGAGC ATTAGCACTT AGGCAAAAAA
  A
  CCACAAAACT TCTCTTCTCT TCCCTGGCAA AGCAAAAAAA AAAAAAAAAA AAGTTATGTT
  AGCACACAAG GTCAGAGGCC TCAACCAGCT GTAATATTTT GTAAGTAATT ATATTTACCT
  TATTAGAAGA AAGATTGCCT TTCTGATTAG ATGTGAAGGG AGTGTTATGC AATAAATATG
  AAGAGCTGAC TGAAAGATAA                                            
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320511734	CHEV_2_133575221	CHEVERUD	SCREENING_POP	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs236244495					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:133591405 () rs orientation: forward

Symbol	Name	Function Class
Gm39940	predicted gene, 39940	within coordinates
Rr565636	regulatory region 565636	665 bp distal
Rr565637	regulatory region 565637	833 bp proximal