rs236187726 SNP Detail

Summary

• ID
  rs236187726
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:8930250 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TGTTTTTTA AACATGTGCT TGTGGTAAGG
  ATAGTATAAA AATAAATGCA TTTGGCCTTA CTTCCCTACA GATAAGAATT TATATTCCTC
  ATCATCATCT TTGGTATCTT ACATGTAAGA AGGTCAAATA TCATCCTCCC AATGACCACT
  M
  CATACAGTAC AGTACAGCCA CCTCCTGCCT TATTCTGTGA TGAACAAAGA AAGGAACCTG
  CCTGTAGGAC TGGTCCACAG GCAATTCCAA CCTGAGGGTA TCCTGAGTGC TTTCTCAACA
  AGGCCAACAA CACAACTTTT AACTAACGTT                                 
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320648900	CHEV_3_8865190	CHEVERUD	SCREENING_POP	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs236187726					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:8930250 () rs orientation: forward

Symbol	Name	Function Class
Mrps28	mitochondrial ribosomal protein S28	Intron
Rr406711	regulatory region 406711	within coordinates
Rr407269	regulatory region 407269	907 bp proximal
Rr573330	regulatory region 573330	1384 bp distal
Rr573331	regulatory region 573331	260 bp distal
Rr573332	regulatory region 573332	283 bp proximal
Tssr32560	transcription start site region 32560	1888 bp upstream