rs236179719 SNP Detail

Summary

• ID
  rs236179719
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:115835012 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CACTTCACTG TGTCTAATGT
  CTCGAAGATT GTCAGAAAAT GCAGTCACAG CTTTACAAAC AGTGTTTGCC CAACCTTGGC
  AAACTCAGTC CTTTAATGGA GTTTCCTCTC TTTTCTATGT AACCGCCTGA TGAGCCTCAG
  GGAATTCACA TGCCATAAAC TTTAGCCTGA GCAAAGCAAC TCGCATGCTG TTTGGCAACT
  Y
  CCAGGTAAGT TTCTTCTCTT TTGACTATCG CCCTCAAATG ACAAACTGCT GCCAGTTGTC
  AGTGCTCAAT AGCAAGCTGG GTCGCACGGT ACCCTCTGCT CAATAGTGTC TGCTGATGGT
  GGGAAAGTGG GTGATCAGAA CTTACGACAT TCTTACATCT TAAGACTGGG TGAAAAGTGA
  AGGGTCCAAA GAATGGTCAG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320894129	CHEV_3_115744281	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs236179719					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:115835012 () rs orientation: forward

Symbol	Name	Function Class
Rr583646	regulatory region 583646	378 bp distal