rs236065745 SNP Detail

Summary

• ID
  rs236065745
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:120018808 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TTTTATTTAT GATTCCTTGA CTCAGTGTAT CTAGATAAAC
  TTCACATAGA GAAGTCTTGC TATACAATTA ATATTAACTT GTCAGAAACG TTTAAAAAGA
  R
  GTCAGCACGT TTCCTTTTTT TTTTTTCAGT CTTCACTCAC TTTGTTCTGT AAAATAATGT
  CTACCATTGA TCAGACAGTT ACTTATATGT CAAGATCTT                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321929676	CHEV_6_119991865	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs236065745					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:120018808 () rs orientation: forward

Symbol	Name	Function Class
Cpgi17917	CpG island 17917	1814 bp distal
Gm66353	predicted gene, 66353	517 bp downstream
Rr399864	regulatory region 399864	1942 bp downstream
Rr637761	regulatory region 637761	1618 bp distal
Rr637763	regulatory region 637763	884 bp proximal
Tssr58518	transcription start site region 58518	1921 bp downstream