rs235875615 SNP Detail

Summary

• ID
  rs235875615
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:33103490 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTAACTCCAT CATATCTACA
  CAATGTTTTC TTAAAAGCTT GAAGCAAGGT AATTATTATC ACACATGTAT GAGTTAAAAG
  GGGCAGCGTT TTCTAGTCTG AAAAGATATA TATGGTTTAC TAAGTCAACC AGGACAAGGC
  AGGCTAAGTC CAGTTGGTAT CAAGGCTTTC CAAATACAGG GCTGTGTTCC ATCCAGAGCA
  Y
  GAAACACAAG GATCCCCCAG GGGACGTTCA GCCGGCAGGA ATCTGAGCAG CCAGCAGCAG
  GAGAAGTCAG TACAGCAGAA TGAATCACAG CCTGGGGCCA AAACTTAACT CAGTCCTAGC
  TCAGCTGCTT TGACAGCTCT TCAGCAGAGG ATAGCAGGCA TCGCGCTACC ACTCTAGGAC
  CAGGATTTCA GCACAGCAGC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321780602	CHEV_6_33076555	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs235875615					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:33103490 () rs orientation: forward

Symbol	Name	Function Class
Rr628172	regulatory region 628172	within coordinates
Rr628173	regulatory region 628173	835 bp proximal