rs235822757 SNP Detail

Summary

• ID
  rs235822757
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:101351352 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGATGCACA CACCTGGTTT
  AACCCATAAA ATCTTAAATG GTGAGCAATA GGGTCCTTTC AGGTGGAGAC CAGATCCTGT
  GGAGATACTG ACAATGGAAG CCAAGGGGAG TCTAGCCAGA CCCATTGGGG CTGGGATAGT
  ATTTCAGTAC TAGTTAATAA GATTCAGCAC ATGTAGGGTA GTATGGTGGG TTACCCAGGA
  R
  GGGACTGTCT AGTCACCTGG TTACACTCCT TTCTTTAGTG GTGACAGTTT TAAAGCTGTG
  ATTTAGGAGG GGAAGGGACA TACACATATT TCACAGATAA TTTGGATAGC AAGAATTAGA
  TACCAAGTAT TCTAACCCCA GAACTTTTCC CCTGGAGTTA AGAAGTCATA GGAACAGGCG
  AAACCTTGTC TAGGGAATTA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321230238	CHEV_4_101166760	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs235822757					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:101351352 () rs orientation: forward

Symbol	Name	Function Class
Cpgi14501	CpG island 14501	1980 bp proximal
D4Mit176.3	DNA segment, Chr 4, Massachusetts Institute of Technology 176.3	1846 bp distal
Rr596165	regulatory region 596165	260 bp distal