rs235593102 SNP Detail

Summary

• ID
  rs235593102
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:109767069 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    tccagcaac cacatggtgg cttacaacca
  tccgtaacga gatctgacgc cctcttccgg agtgtctgaa gacagctaca gtgtacttac
  atataataaa ttaaaaaaaa aaaaaaGATG CTGCAAGCAT Ttgtgtgtgt gtgtatgcac
  R
  ggattgtaag agcattgaag ttaaggtccc tctacattat atttattcat tcatttaaac
  acaaattctc ctactgaatc tggagcttgc agttttggct atcctggctg gccagggagt
  ccccgggacc cacccctctc tgtgctcctg                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322394804	CHEV_7_117311376	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs235593102					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:109767069 () rs orientation: forward

Symbol	Name	Function Class
Gm72506	predicted gene, 72506	22 bp downstream
Rr1426	regulatory region 1426	1341 bp downstream
Rr653207	regulatory region 653207	1380 bp distal
Rr653208	regulatory region 653208	1159 bp distal
Tssr2368	transcription start site region 2368	1603 bp upstream
Tssr74254	transcription start site region 74254	1499 bp upstream