rs235576585 SNP Detail

Summary

• ID
  rs235576585
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:132253404 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    ATGTTTATA GGGCCCAGGG CTCTCTCTGT
  AAGAATTGGG CAAAGAAACC TGGGCGGTGG TGTAAGAATT GGGCAAAGAA ACctgggcgg
  tggtgacgca cgcctttaat tccaacactt gggaggcaga tgcaggcgga tttctgagtt
  Y
  gaggccaacc tgatctacaa agtgagttcc aggacagcca gggctataca gggaaaccct
  gtctcgaaaa acaaaaGACA AAAACCAAAA CAAAACACAG ATGCTACCCT TAAAATAGAG
  TATACCTCTT GGTGACAAGG TAGAAACTGA                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321334105	CHEV_4_132082008	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs235576585					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:132253404 () rs orientation: forward

Symbol	Name	Function Class
Gm68741	predicted gene, 68741	within coordinates
Rr377208	regulatory region 377208	673 bp downstream
Rr377209	regulatory region 377209	1055 bp upstream
Rr601000	regulatory region 601000	934 bp distal
Rr601001	regulatory region 601001	687 bp proximal
Rr601002	regulatory region 601002	779 bp proximal