rs235517965 SNP Detail

Summary

• ID
  rs235517965
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:86983277 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    AAAAATCCA TGATCTATAC TATAGGGAAG
  ATTGTAATAT ATATATGTAt atgtatgtat gtatgtatgt atgtatctat ctatctatct
  acctatctat ctatctatct atctatctat ctatctatct atctatctat ctatctatat
  M
  tatatATGTG TGTGTGTGTT TATGTTTGCT TATCACTTGT GATCATGACA TTCTGGGATT
  TAGGACACTG ATGTCACCTG CTTACCACCT GTTCCTGAAA CCATCAGGCT ACTACTATCA
  AGCCAGCAGA GAGGGAAAGA AATGAGGGCA                                 
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321199704	CHEV_4_86710944	CHEVERUD	SCREENING_POP	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs235517965					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:86983277 () rs orientation: forward

Symbol	Name	Function Class
Rr594860	regulatory region 594860	1765 bp distal
Rr594861	regulatory region 594861	310 bp proximal
Slc24a2	solute carrier family 24 (sodium/potassium/calcium exchanger), member 2	Intron