rs235493227 SNP Detail

Summary

• ID
  rs235493227
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:115747952 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    ATGGAAAAT AGTTCCAGGA GGATGAGTTT
  CTGACTTTCC CACAGGTCAA AGTCAGTCAC CTGCTATTGG ATACAGTTTG ATCCCCAGAG
  TCTCCAGCTG TAGGTTTAGC CCTGTGACCT CGAtcttaac taggcctctg ttgctgtgtt
  R
  aaacaccatg acctaggcaa ctaatagaag tgagggtttg tttggcttta cggtcccaga
  gggacaagag tccatcctgg ctggaaagtg acagcaggtc tggcaagaag agcaggaagt
  tcagctgtca catctttcag agaaactgtg                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321916717	CHEV_6_115721009	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs235493227					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:115747952 () rs orientation: forward

Symbol	Name	Function Class
Gm44180	predicted gene, 44180	664 bp upstream
Rr637050	regulatory region 637050	747 bp distal
Rr637051	regulatory region 637051	288 bp distal
Rr637052	regulatory region 637052	within coordinates
Rr637053	regulatory region 637053	1180 bp proximal
Rr637054	regulatory region 637054	1400 bp proximal
Rr637055	regulatory region 637055	1594 bp proximal
Rr637056	regulatory region 637056	1834 bp proximal