rs235142335 SNP Detail

Summary

• ID
  rs235142335
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:103278405 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TCTCTTCCA GTGACAGGAC ACAAGGCTGG
  AGGCAGAAAA AATTGTAATA ATGACAGAGG GGTCCATCTT CCCCTATAGG CTAAGAGGAA
  AGTAGATGAG AAGGGGACTA GGCAGGAGGG AGCCACCCTG TTTTTCTCTT TCTATCACAG
  Y
  ACATCCATGG CCAGGAGAAG TCCTGCTGGG CCCCACTCTC CACTGGAATG CTTCATCTTT
  CTCTGGTGCA GACAACAGCA CAAACCCTGC ATCTTTTTGT CTGTCCTCAT GTTTTATTCT
  CAGAATACTG AGAACACACC TTCAGAAACC                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321237105	CHEV_4_103093813	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs235142335					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:103278405 () rs orientation: forward

Symbol	Name	Function Class
Gm12718	predicted gene 12718	within coordinates
Rr596398	regulatory region 596398	389 bp proximal