rs235063463 SNP Detail

Summary

• ID
  rs235063463
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:104515336 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    cccaacctc TGCAGCTGTT TTGGTTGGTT
  TGGTTTTTTG AGACAGAAGA CAGCTAAGGC TAGCTGTGGA TTTCTGTTTT TCCTTTCAGG
  CGCTAGAGCA ACTGACTGTC CTGGGGCCAA GGTCTACGTT CCACTGGATT CTCTAAGGTC
  R
  TGGTATTTAC TGCTAGTTGA ACAACTCAGT AGGTGCAAGT CAGTGGGGTG ACTGGTTAGT
  AAATAAGATT AAGTTAGAAA ACAGGTTAAA CATAGGACAA GTTCTACCTC GGGAGGTGTC
  TACTTCAGTC TATCTGTGTT AGAATGTTCT                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320445331	CHEV_2_104525148	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs235063463					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:104515336 () rs orientation: forward

Symbol	Name	Function Class
Rr562107	regulatory region 562107	595 bp proximal
Rr562108	regulatory region 562108	1842 bp proximal
Tcp11l1	t-complex 11 like 1	Intron