rs235060396 SNP Detail

Summary

• ID
  rs235060396
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:9665577 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTAGATACTT TGGATACACT
  TTGGAAAACT GACATTTCTA GCCACAATTC CAACAGAGCG GTGTGAACCT CATTCCTGGG
  CATAAGAAAC AATCCCAGAA GGAGGGTAAT GGGCAGGGCT GGGCAGCCCG AGGGACTGCA
  GCAGAAGCCA GAGTTGGACA GCTATTTCTT CTTGCAAGAT CTGTATCCTC CAGAGACAAG
  R
  CAGGGAGTTA GATTACTAGA TAATCTCCAT GTCCTTCCAA CCCCAGCCAT CTACAAGTCT
  GTGAATGACA ACTTTGTGTA GTATCTTTAG CACACACTTT CTGCGTGAGC CAACACAATT
  TGCAAAGCAT GCAGTTGCTA GAAAACGAGA AGGCAGTAAG GTGGGACACA TGATCCCTGC
  CAAAGGCCCT TTGCATCACC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320651642	CHEV_3_9600517	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs235060396					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:9665577 () rs orientation: forward

Symbol	Name	Function Class
Rr374491	regulatory region 374491	within coordinates
Rr573455	regulatory region 573455	309 bp distal
Rr573456	regulatory region 573456	143 bp proximal
Zfp704	zinc finger protein 704	Intron