rs234728215 SNP Detail

Summary

• ID
  rs234728215
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:127741230 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTACAATGAA CAAGTTATGC
  ACACGAAGCA GATGCTGTCA TTTCTGTTTG TAATGAGAGG CATTTTTGTT TGACTGTAGA
  GAGGTTTTTT AAAAATTATT TTAATATATG AAATTGTAAG GAAAAAAATT AATAGAAAAT
  ATTTCCCATT AAGAGCTTGC AGCCAACGTG TAGGGAACAA ACAAGAACTC ACCATGGGCA
  Y
  AGACTTAAGT AGCTCTGAAC AGAGATGAAG TTCAAAGGCA TCCCTTGACC AAGAGAGGCT
  ACCACTCTTG ACTCTAAACG TGATCTCTGA GCTTGACTTC CAGCTGCCAG ACATCCAGAG
  TTGTTTTATC CTGCATTGGG GTTCTTAGAA TGATCTAAAG TATTTCTCCT TACTTTTTCA
  GGAACCCCCA AGAATCTCGA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320958537	CHEV_3_127650499	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs234728215					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:127741230 () rs orientation: forward

Symbol	Name	Function Class
9830132P13Rik	RIKEN cDNA 9830132P13 gene	within coordinates
Rr398010	regulatory region 398010	1440 bp upstream
Rr584909	regulatory region 584909	853 bp proximal
Rr584910	regulatory region 584910	1292 bp proximal
Rr584911	regulatory region 584911	1519 bp proximal