TTCTTGTAAG AAGAGAGAAA GAAAAGGACA CTACCAGCAT CCTGCCCGTA TATATATGAC AGCACACTCA CCACACTCTC CTGTCTGCAG GACAGACTGA CAGTTTCCAA TTGAGACCAC TCACTGACTC TCGTGATCAA GGACTGTGCC ACTTCTTCAC CAACACCATC TTATTCGATC CCTGCCGATG CCCAAGGCAA Y GCTCTTCCCT CATTTTGTAG CCCCTGGAGA GGTGGCTGAT GGAGCTGAAG TGCTTGTAGC CCAGGGCTGG GAAGCTGATG CCTTGGCTTG CCTGACAAGT GTCACCTGCA AATGGCAGTA CCCGCCACAC TCTCATCATC AGAAACAACT TGTTTTCTCT GTACCCGAGA TTGCCTGGGA CCCTGGAAAG AGAAAAGATG Y = C/T Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | LG/J |
SM/J |
---|---|---|---|---|---|---|---|
ss320767050 | CHEV_3_53027648 | CHEVERUD | SCREENING_POP | f | SNP | C | T |
SNP Consensus Information | |||||||
SNP | Consensus Type | LG/J |
SM/J |
||||
rs234628474 | SNP | C | T |
Location: Chr3:53131147 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Lhfpl6 | LHFPL tetraspan subfamily member 6 | Intron | ||||||
Noncoding-Transcript-Variant | ||||||||
Rr576662 | regulatory region 576662 | 1870 bp distal | ||||||
Rr576663 | regulatory region 576663 | 1937 bp proximal |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 03/25/2025 MGI 6.24 |
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