rs234540686 SNP Detail

Summary

• ID
  rs234540686
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:62541049 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    GACTCACCC TGGTCTTTCC CTGCCCTAGG
  GGTATCTTGG GACTCCCCCT TGAAGCCATT TTTCTGACCT AAGTAATCTG AATGAGCCAG
  TGGGCCATGC TGCACACAGA ATCGCTCTTt ttgttttttg gaagattttg tcttaaaaaa
  W
  ttttttttaa ttttatttta aactatgctt atatgtgtgc ctggccatgt gtaggtcaga
  ggtgttggat tccccccgaa gctggagtta taggcaaatg tgagctgact tggagactgg
  gaatagaacc caagagctag tattagcaag                                 
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321142787	CHEV_4_62283846	CHEVERUD	SCREENING_POP	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs234540686					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:62541049 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Rgs3	regulator of G-protein signaling 3			Intron
				Noncoding-Transcript-Variant
Rr593363	regulatory region 593363			146 bp distal