rs234492709 SNP Detail

Summary

• ID
  rs234492709
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:115748831 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGCTACACAG AGAAACTCTG
  TCTTTTGGTT TTTTTATAAG ATTCATTTAT TTATTATATG TAAGTACACA GTAGATGTCT
  TCAGACACCC CCATAAGAGG GCATCAGATC TCAGATCTCA TTACAGATGG TTGTGAGCCA
  CCATGTGGTT GCTGGGATTT GAACTCAGGA CCTTCAGAAG GGCAGTCAGT GCTCTTAACC
  R
  CTGAGCCATC TCTCCAGCCC ACCCTGTCTT GAGAAACCAA AATTAACTAG TTAATTAATT
  ATGGGTAGAA GGATGGCTCA GTGGTTTAGA GCACTTGTTA TTCTTCTTTT AAAAAAAGAT
  TTATTTATTA ATTTATTTTA TGTATGAGAG TACACTGTAG CTGTACAGAT GGTTGTGAGC
  CTTCTATGTG GTTGTTGGGA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321916720	CHEV_6_115721888	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs234492709					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:115748831 () rs orientation: forward

Symbol	Name	Function Class
Gm44180	predicted gene, 44180	1543 bp upstream
Rr637050	regulatory region 637050	1626 bp distal
Rr637051	regulatory region 637051	1167 bp distal
Rr637052	regulatory region 637052	734 bp distal
Rr637053	regulatory region 637053	301 bp proximal
Rr637054	regulatory region 637054	521 bp proximal
Rr637055	regulatory region 637055	715 bp proximal
Rr637056	regulatory region 637056	955 bp proximal