rs234407473 SNP Detail

Summary

• ID
  rs234407473
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:82462262 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGTTGGCCT TCCACTTTTT
  GGGTTCCAGG GATCAAATTT AGACGATGAT CAGTTTTGAT GATCAGTTTT GGCAACAAGC
  ACCTGCTGAG CCATGTCATC AGGCCCACGT GACAGGTTCT TTAGAGACAT AATTGTGTCT
  CAGTGAGGTA AGCCTTAATC TAGGGTAACT GGCCTGGAAC AGATGAAAGG TTGACAGAAA
  Y
  GTGTATAGAG CGAGACCATA TAAAGATACA AGGACAAGGA ACCAGATGCA AGGATCAGAG
  GCCCGATATA AACCAAGGAA AGATCCTCAA CCCTGCTGAT AACCTTGGTC TCAGATGTGA
  GACTCCAACT GTGAGGTGAT TGCCTTTGTT TAAACTGCTA GATTTTGTGG CATTTGATTG
  TGGCAGTTCC ATCAAACTAA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321185793	CHEV_4_82189929	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs234407473					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:82462262 () rs orientation: forward

Symbol	Name	Function Class
Gm11266	predicted gene 11266	within coordinates
Rr594369	regulatory region 594369	1429 bp distal
Rr594370	regulatory region 594370	1696 bp distal
Rr594371	regulatory region 594371	675 bp distal