rs234144172 SNP Detail

Summary

• ID
  rs234144172
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:142440798 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CACCTCACAC ACACACATGC
  GTTAGCTGTG GAGTGATGGT GATTGAAAGC GTTAATTATC AAAATTGTGT CATCAATTCT
  AATGTGTGCA CACACACACA CACATGAGGG TGTGAGCACA GACACACATA TATTATTATT
  TTTAAAGTTA TGCCTTCATA CAGCTGAAAA GGGAAAACAA ATAAATCGGG AAGCTACAGT
  R
  AGCCAGGCGT CTGTGTTCAT ACCTAAGGCT TTAATACTTA TTGTGAGTCA ACAGGGCACA
  GGCACTGGCT CCAGGTACTC TGTTTACTTG CAGACATGAC CCTCCCTCCC ACCCCTTTTC
  TTTTAGCTCA GAGAATAGAG TACTTGTCAG TAAATACAGG CTACATGCAA ATTAAAGTTT
  TGGTTGTTCG CCAAGAGTGA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320531960	CHEV_2_142424614	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs234144172					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:142440798 () rs orientation: forward

Symbol	Name	Function Class
Rr566224	regulatory region 566224	234 bp proximal