rs234062425 SNP Detail

Summary

• ID
  rs234062425
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:16365261 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATTAAAAAAA AAGAAAAAAA
  ACAATTGCTT GATTCTCTGC TCGTATTTAT TGCCATACAT TTGTCTGAAT TAGCACTTAT
  TTGTAGAATG CAAATGGTTT GGGAGCTACA GTTCTGAAGA GAAAAGATAA TTTAATTTTA
  CCACCAGATG GCAGCAGTGT AGAATTTTGA AAGTCTGAAC TGTATGTAGA TTTCTTCGAA
  R
  ACCAGATATT TTAAATTTCA TAAGTTTAAC TTGTCCTTTA TGATAATTCA GCTTCGTTGG
  AAGAAAGCTG AACTTCATTT TGACATACAG AAAATAAGCT TGACCTCTGC ATGATTGGGA
  TTAATTACCT GGATTAATGG TACTTTAATA TATTTCTAGA TATGCTTATA CAACTAATAA
  TTATTTTTAA AAGAATCTAC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320671141	CHEV_3_16211097	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs234062425					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:16365261 () rs orientation: forward

Symbol	Name	Function Class
Rr573795	regulatory region 573795	within coordinates
Rr573796	regulatory region 573796	43 bp distal